# gmx_tutorials_livecoms

**Repository Path**: chenbq479/gmx_tutorials_livecoms

## Basic Information

- **Project Name**: gmx_tutorials_livecoms
- **Description**: LiveCoMS GROMACS Tutorials Paper
- **Primary Language**: Unknown
- **License**: CC-BY-4.0
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 1
- **Forks**: 0
- **Created**: 2021-12-17
- **Last Updated**: 2023-06-21

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# From Proteins to Perturbed Hamiltonians: A Suite of Tutorials for the GROMACS-2018 Molecular Simulation Package 

This document contains a description of seven tutorials for carrying out different types
of molecular dynamics (MD) simulations in the popular, open-source GROMACS package.

## List of Authors

- Justin A. Lemkul, Virginia Tech, Blacksburg, VA, USA

## List of Contributors
<!-- We suggest listing contributers in order of addition. -->

## Paper writing as code development
<!-- This discussion is so that people know how to contribute to your document. -->
This paper is being developed as a living document, open to changes from the community. You can read more about the concept of writing a paper in the same way one would write software code in the essay ["Paper writing as code development"](https://livecomsjournal.github.io/about/paper_code/). If you have comments or suggestions, we welcome them! Please [submit them as issues](https://guides.github.com/features/issues/) to this GitHub repository so they can be recorded and given credit for the contribution. Specific changes can be proposed [via pull requests](https://help.github.com/articles/about-pull-requests/).

## List of Released Versions
<!-- update this when you decide to release a version either by preprint or when submitted to LiveCoMS-->
- v1.0: Submitted to LiveCoMS

## Changelog
<!-- Here, record summaries of important changes. A granular discussion of changes will be kept in GitHub by issue tracking.-->
- 5 March 2018: Started document
- 10 July 2018: First full draft completed, all tutorials updated for GROMACS-2018
- 27 August 2018: Revised based on peer review comments
- 10 September 2018: Revised based on editorial comments
- 30 December 2018: Final version of PDF and article files for publication in LiveCoMS
- 2 January 2019: Final formatting fixes