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Ji Hongchao / TarMet
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NAMESPACE 1.12 KB
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Ji Hongchao 提交于 2021-10-09 14:12 . DDA MS/MS
import("mzR", "data.table", "enviPat", "Matrix", "shiny", "plotly", "MassSpecWavelet", "MSnbase")
exportPattern("runTarMet",
# INPUT FUNCTIONS
"getSampleName",
"getCandidateFormula",
"getTargets",
"getElements",
"getElementNum",
# DATA PROCESS FUNCTIONS
"LoadData",
"getEIC",
"getIsotopicPattern",
"getMzWithTracer",
"getMzRanges",
"getMzEICs",
# PEAK DETECTION
"getIsotopicPeaks",
"getArea",
"getIsotopicSimilarity",
"widthEstimationCWT",
"extendNBase",
"extendLength",
"integration",
# BASELINE
"airPLS",
"WhittakerSmooth",
# ALIGNMENT
"getAlignedEICs",
"PAFFT",
"getQuantifiedResult",
# PLOT
"plotEICs",
"plotStackBar")
R
1
https://gitee.com/hcji/TarMet.git
git@gitee.com:hcji/TarMet.git
hcji
TarMet
TarMet
master

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