# sciCSR

**Repository Path**: joyeric_admin_admin/sciCSR

## Basic Information

- **Project Name**: sciCSR
- **Description**: Ng, J.C.F., Montamat Garcia, G., Stewart, A.T. et al. sciCSR infers B cell state transition and predicts class-switch recombination dynamics using single-cell transcriptomic data. Nat Methods (2023). 
- **Primary Language**: Unknown
- **License**: GPL-3.0
- **Default Branch**: main
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2024-11-02
- **Last Updated**: 2024-11-02

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# sciCSR

[![DOI](https://zenodo.org/badge/492787223.svg)](https://zenodo.org/badge/latestdoi/492787223)

<img src="man/figures/sciCSR_logo.png" alt="logo" width="200" height="250">
Single-cell inference of Class Switch Recombination

## Documentation

**Documentation is available:** [here](https://josephng-bio.org/sciCSR)

## Citation

To cite sciCSR in publications, please use:

Ng, J.C.F., Montamat Garcia, G., Stewart, A.T. et al. sciCSR infers B cell state transition and predicts class-switch recombination dynamics using single-cell transcriptomic data. Nat Methods (2023). https://doi.org/10.1038/s41592-023-02060-1

Citation formatted in BibTEX:

```
@article{ng_scicsr_2023,
        title = {{sciCSR} infers {B} cell state transition and predicts class-switch recombination dynamics using single-cell transcriptomic data},
        issn = {1548-7105},
        doi = {10.1038/s41592-023-02060-1},
        journal = {Nature Methods},
        author = {Ng, Joseph C. F. and Montamat Garcia, Guillem and Stewart, Alexander T. and Blair, Paul and Mauri, Claudia and Dunn-Walters, Deborah K. and Fraternali, Franca},
        month = nov,
        year = {2023},
        pmid = {37932398},
}

```