# gffread

**Repository Path**: shineboy/gffread

## Basic Information

- **Project Name**: gffread
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: MIT
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2024-07-03
- **Last Updated**: 2024-07-03

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

## GffRead 

GFF/GTF utility providing format conversions, filtering, FASTA sequence 
extraction and more.

More details and usage examples can be found in the paper [DOI: 10.12688/f1000research.23297.1](http://dx.doi.org/10.12688/f1000research.23297.1) which can be also used to cite this software.

The official webpage with download packages for this utility can be found online here: 
 http://ccb.jhu.edu/software/stringtie/gff.shtml#gffread

Use `gffread -h` to see the command line usage options.

## Installation
Building this program from source requires the [GCLib](../../../gclib) source code 
library. The `make` command should automatically fetch the latest gclib version from the repository if no `../gclib` directory is found.

```
  cd /some/build/dir
  git clone https://github.com/gpertea/gffread
  cd gffread
  make release
```
This should create the **gffread** binary in the current directory.