# SpatialViewPy

**Repository Path**: shuliping/SpatialViewPy

## Basic Information

- **Project Name**: SpatialViewPy
- **Description**: No description available
- **Primary Language**: Unknown
- **License**: MIT
- **Default Branch**: main
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2024-03-13
- **Last Updated**: 2024-03-13

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# SpatialViewPy

## Installation

Run the folling to install:

```python
pip install spatialviewpy
```

## Usage

[SpatialView](https://github.com/kendziorski-lab/spatialview) is a browser-based interactive application to visualize 10x spatial transcriptomics data. [SpatialView](https://github.com/kendziorski-lab/spatialview) is highly interactive and capable of visualizing multiple samples simultaneously. It enables users to form groups by drag-and-drop samples. [BioRxiv](https://doi.org/10.1101/2023.06.13.544836)

SpatialViewPy prepares data and runs SpatialView from ScanPy objects.

Please check the [step by step tutorial](https://github.com/kendziorski-lab/SpatialViewPy/blob/main/notebooks/tutorial.ipynb).

[Demo Application](https://www.biostat.wisc.edu/~kendzior/spatialviewdemo/)