# grid_cell_analysis

**Repository Path**: song_fei_sia/grid_cell_analysis

## Basic Information

- **Project Name**: grid_cell_analysis
- **Description**: Analysis for grid cells, grid fields, and head direction.
- **Primary Language**: Unknown
- **License**: GPL-3.0
- **Default Branch**: master
- **Homepage**: None
- **GVP Project**: No

## Statistics

- **Stars**: 0
- **Forks**: 0
- **Created**: 2020-08-09
- **Last Updated**: 2020-12-20

## Categories & Tags

**Categories**: Uncategorized

**Tags**: None

## README

# Code for grid cell analysis

For replicating specific figures from the paper, please see scripts in OverallAnalysis. Details on which script is needed for which figure are in: Gerlei_et_at_2020_where_to_find_data_and_code.xlsx

The grid cell data is available from: https://datashare.is.ed.ac.uk/handle/10283/3674

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To use the code for analyzing spatial cells such as head direction cells and grid cells, see scripts in PostSorting.
See some examples of using PostSorting here:
https://github.com/MattNolanLab/grid_cell_analysis/blob/master/example_spatial_analysis.py

There is more detailed documentation on how the code is organized and what the main data frames contain:
https://github.com/MattNolanLab/grid_cell_analysis/wiki/Content-of-data-frame-columns


Please don't hesitate to submit an issue if there's a problem.


![grid_cells](https://user-images.githubusercontent.com/16649631/85288620-ef83c480-b48d-11ea-9904-d9dacfb3c110.jpg)