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+Name:    bcftools
+Version: 1.10.2
+Release: 1
+Summary: Tools for genomic variant calling and manipulating VCF/BCF files
+
+# This software is available under a choice of one of two licenses,
+# the MIT/Expat (MIT) or the GNU General Public License Version 3 (GPLv3+).
+# And if compiled with the GNU Scientific Library, in this case it is built
+# with --enable-libgsl, the use of this software is governed by the GPLv3+
+# license.
+# See <https://github.com/samtools/bcftools/blob/develop/LICENSE>.
+License: GPLv3+
+URL:     https://www.htslib.org/
+Source0: https://github.com/samtools/%{name}/releases/download/%{version}/%{name}-%{version}.tar.gz
+
+
+BuildRequires: gcc autoconf automake gsl-devel htslib-devel htslib-tools zlib-devel
+# bcftools had been included in samtools version 0.X.
+# https://github.com/samtools/samtools/commit/e7ae7f96c7e78a2dd6eabdaed57037c483951929
+Conflicts: samtools < 1.0
+
+
+%description
+BCFtools is a set of utilities that manipulate genomic variant calls in the
+Variant Call Format (VCF) and its binary counterpart (BCF). All commands work
+transparently with both VCFs and BCFs, both uncompressed and BGZF-compressed.
+
+
+%prep
+%setup -q
+
+%build
+autoheader
+autoconf
+%configure CFLAGS="%{optflags}" LDFLAGS="%{build_ldflags}" \
+  --prefix=%{_prefix} \
+  --with-htslib=system \
+  --enable-perl-filters \
+  --enable-libgsl \
+  --with-bcf-plugin-path='%{_usr}/local/libexec/bcftools:$(plugindir)'
+%make_build
+
+
+%install
+%make_install
+
+
+%check
+# Check if bcftools is built with system htslib.
+ldd bcftools | grep -E '/lib(64)?/libhts\.so\.'
+
+make test
+
+
+%files
+%doc AUTHORS NEWS
+%license LICENSE
+%{_bindir}/bcftools
+%{_bindir}/color-chrs.pl
+%{_bindir}/guess-ploidy.py
+%{_bindir}/plot-roh.py
+%{_bindir}/plot-vcfstats
+%{_bindir}/run-roh.pl
+%{_bindir}/vcfutils.pl
+%{_libexecdir}/bcftools
+%{_mandir}/man1/bcftools.1*
+
+
+%changelog
+* Wed Jun 16 2021 zhao yang <yangzhao1@kylinos.cn> - 1.10.2-1
+- package init
\ No newline at end of file