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【openEuler-24.03-LTS-SP1-round3】【arm/x86】 ncbi-blast和bzip2-devel, ncbi-blast和proj-devel存在安装文件冲突
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#IB8Q55
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liikii
创建于
2024-12-03 15:17
【环境信息】 软件信息: 1) OS版本及分支: openEuler-24.03-LTS-SP1-round3 2) 内核信息: 6.6.0-59.0.0.62.oe2403sp1.x86_64 【缺陷所属软件及版本号】 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 【操作步骤】 yum install ncbi-blast bzip2-devel yum install ncbi-blast proj-devel 【预期结果】 无冲突,都安装成功 【实际结果】 有冲突文件导致安装失败 Error: Transaction test error: 试图安装 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 会导致文件 /usr/lib64/libbz2.so 冲突 Error: Transaction test error: 试图安装 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 会导致文件 /usr/lib64/libproj.so 冲突 ``` [root@localhost home]# [root@localhost home]# yum install ncbi-blast bzip2-devel Last metadata expiration check: 0:06:18 ago on 2024年12月03日 星期二 17时03分20秒. Dependencies resolved. ========================================================================================================================================================================================================== Package Architecture Version Repository Size ========================================================================================================================================================================================================== Installing: bzip2-devel x86_64 1.0.8-8.oe2403sp1 OS 37 k ncbi-blast x86_64 2.14.0-2.oe2403sp1 EPOL 22 M Transaction Summary ========================================================================================================================================================================================================== Install 2 Packages Total download size: 22 M Installed size: 95 M Is this ok [y/N]: y Downloading Packages: (1/2): bzip2-devel-1.0.8-8.oe2403sp1.x86_64.rpm 317 kB/s | 37 kB 00:00 (2/2): ncbi-blast-2.14.0-2.oe2403sp1.x86_64.rpm 1.5 MB/s | 22 MB 00:14 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Total 1.5 MB/s | 22 MB 00:14 Running transaction check Transaction check succeeded. Running transaction test The downloaded packages were saved in cache until the next successful transaction. You can remove cached packages by executing 'yum clean packages'. Error: Transaction test error: 试图安装 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 会导致文件 /usr/lib64/libbz2.so 冲突 [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# yum install ncbi-blast proj-devel Last metadata expiration check: 0:11:08 ago on 2024年12月03日 星期二 17时03分20秒. Dependencies resolved. ========================================================================================================================================================================================================== Package Architecture Version Repository Size ========================================================================================================================================================================================================== Installing: ncbi-blast x86_64 2.14.0-2.oe2403sp1 EPOL 22 M proj-devel x86_64 9.3.0-1.oe2403sp1 everything 85 k Installing dependencies: cmake-filesystem x86_64 3.27.9-5.oe2403sp1 OS 7.7 k libcurl-devel x86_64 8.4.0-11.oe2403sp1 OS 146 k libjpeg-turbo-devel x86_64 3.0.1-2.oe2403sp1 OS 98 k libtiff-devel x86_64 4.6.0-3.oe2403sp1 OS 33 k proj x86_64 9.3.0-1.oe2403sp1 everything 1.5 M sqlite-devel x86_64 3.42.0-3.oe2403sp1 OS 157 k zlib-devel x86_64 1.2.13-4.oe2403sp1 OS 91 k Transaction Summary ========================================================================================================================================================================================================== Install 9 Packages Total size: 24 M Total download size: 2.1 M Installed size: 102 M Is this ok [y/N]: y Downloading Packages: [SKIPPED] ncbi-blast-2.14.0-2.oe2403sp1.x86_64.rpm: Already downloaded (2/9): cmake-filesystem-3.27.9-5.oe2403sp1.x86_64.rpm 86 kB/s | 7.7 kB 00:00 (3/9): libtiff-devel-4.6.0-3.oe2403sp1.x86_64.rpm 276 kB/s | 33 kB 00:00 (4/9): libjpeg-turbo-devel-3.0.1-2.oe2403sp1.x86_64.rpm 360 kB/s | 98 kB 00:00 (5/9): libcurl-devel-8.4.0-11.oe2403sp1.x86_64.rpm 306 kB/s | 146 kB 00:00 (6/9): sqlite-devel-3.42.0-3.oe2403sp1.x86_64.rpm 517 kB/s | 157 kB 00:00 (7/9): zlib-devel-1.2.13-4.oe2403sp1.x86_64.rpm 332 kB/s | 91 kB 00:00 (8/9): proj-devel-9.3.0-1.oe2403sp1.x86_64.rpm 581 kB/s | 85 kB 00:00 (9/9): proj-9.3.0-1.oe2403sp1.x86_64.rpm 567 kB/s | 1.5 MB 00:02 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Total 677 kB/s | 2.1 MB 00:03 Running transaction check Transaction check succeeded. Running transaction test The downloaded packages were saved in cache until the next successful transaction. You can remove cached packages by executing 'yum clean packages'. Error: Transaction test error: 试图安装 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 会导致文件 /usr/lib64/libproj.so 冲突 [root@localhost home]# ``` 【附件】 openEuler-24.03-LTS-SP1-round3.repo ``` [OS] name=OS baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/RPM-GPG-KEY-openEuler [everything] name=everything baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/everything/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/everything/$basearch/RPM-GPG-KEY-openEuler [EPOL] name=EPOL baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/EPOL/main/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/RPM-GPG-KEY-openEuler ```
【环境信息】 软件信息: 1) OS版本及分支: openEuler-24.03-LTS-SP1-round3 2) 内核信息: 6.6.0-59.0.0.62.oe2403sp1.x86_64 【缺陷所属软件及版本号】 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 【操作步骤】 yum install ncbi-blast bzip2-devel yum install ncbi-blast proj-devel 【预期结果】 无冲突,都安装成功 【实际结果】 有冲突文件导致安装失败 Error: Transaction test error: 试图安装 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 会导致文件 /usr/lib64/libbz2.so 冲突 Error: Transaction test error: 试图安装 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 会导致文件 /usr/lib64/libproj.so 冲突 ``` [root@localhost home]# [root@localhost home]# yum install ncbi-blast bzip2-devel Last metadata expiration check: 0:06:18 ago on 2024年12月03日 星期二 17时03分20秒. Dependencies resolved. ========================================================================================================================================================================================================== Package Architecture Version Repository Size ========================================================================================================================================================================================================== Installing: bzip2-devel x86_64 1.0.8-8.oe2403sp1 OS 37 k ncbi-blast x86_64 2.14.0-2.oe2403sp1 EPOL 22 M Transaction Summary ========================================================================================================================================================================================================== Install 2 Packages Total download size: 22 M Installed size: 95 M Is this ok [y/N]: y Downloading Packages: (1/2): bzip2-devel-1.0.8-8.oe2403sp1.x86_64.rpm 317 kB/s | 37 kB 00:00 (2/2): ncbi-blast-2.14.0-2.oe2403sp1.x86_64.rpm 1.5 MB/s | 22 MB 00:14 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Total 1.5 MB/s | 22 MB 00:14 Running transaction check Transaction check succeeded. Running transaction test The downloaded packages were saved in cache until the next successful transaction. You can remove cached packages by executing 'yum clean packages'. Error: Transaction test error: 试图安装 bzip2-devel-1.0.8-8.oe2403sp1.x86_64 和 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 会导致文件 /usr/lib64/libbz2.so 冲突 [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# [root@localhost home]# yum install ncbi-blast proj-devel Last metadata expiration check: 0:11:08 ago on 2024年12月03日 星期二 17时03分20秒. Dependencies resolved. ========================================================================================================================================================================================================== Package Architecture Version Repository Size ========================================================================================================================================================================================================== Installing: ncbi-blast x86_64 2.14.0-2.oe2403sp1 EPOL 22 M proj-devel x86_64 9.3.0-1.oe2403sp1 everything 85 k Installing dependencies: cmake-filesystem x86_64 3.27.9-5.oe2403sp1 OS 7.7 k libcurl-devel x86_64 8.4.0-11.oe2403sp1 OS 146 k libjpeg-turbo-devel x86_64 3.0.1-2.oe2403sp1 OS 98 k libtiff-devel x86_64 4.6.0-3.oe2403sp1 OS 33 k proj x86_64 9.3.0-1.oe2403sp1 everything 1.5 M sqlite-devel x86_64 3.42.0-3.oe2403sp1 OS 157 k zlib-devel x86_64 1.2.13-4.oe2403sp1 OS 91 k Transaction Summary ========================================================================================================================================================================================================== Install 9 Packages Total size: 24 M Total download size: 2.1 M Installed size: 102 M Is this ok [y/N]: y Downloading Packages: [SKIPPED] ncbi-blast-2.14.0-2.oe2403sp1.x86_64.rpm: Already downloaded (2/9): cmake-filesystem-3.27.9-5.oe2403sp1.x86_64.rpm 86 kB/s | 7.7 kB 00:00 (3/9): libtiff-devel-4.6.0-3.oe2403sp1.x86_64.rpm 276 kB/s | 33 kB 00:00 (4/9): libjpeg-turbo-devel-3.0.1-2.oe2403sp1.x86_64.rpm 360 kB/s | 98 kB 00:00 (5/9): libcurl-devel-8.4.0-11.oe2403sp1.x86_64.rpm 306 kB/s | 146 kB 00:00 (6/9): sqlite-devel-3.42.0-3.oe2403sp1.x86_64.rpm 517 kB/s | 157 kB 00:00 (7/9): zlib-devel-1.2.13-4.oe2403sp1.x86_64.rpm 332 kB/s | 91 kB 00:00 (8/9): proj-devel-9.3.0-1.oe2403sp1.x86_64.rpm 581 kB/s | 85 kB 00:00 (9/9): proj-9.3.0-1.oe2403sp1.x86_64.rpm 567 kB/s | 1.5 MB 00:02 ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- Total 677 kB/s | 2.1 MB 00:03 Running transaction check Transaction check succeeded. Running transaction test The downloaded packages were saved in cache until the next successful transaction. You can remove cached packages by executing 'yum clean packages'. Error: Transaction test error: 试图安装 ncbi-blast-2.14.0-2.oe2403sp1.x86_64 和 proj-devel-9.3.0-1.oe2403sp1.x86_64 会导致文件 /usr/lib64/libproj.so 冲突 [root@localhost home]# ``` 【附件】 openEuler-24.03-LTS-SP1-round3.repo ``` [OS] name=OS baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/RPM-GPG-KEY-openEuler [everything] name=everything baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/everything/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/everything/$basearch/RPM-GPG-KEY-openEuler [EPOL] name=EPOL baseurl=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/EPOL/main/$basearch/ enabled=1 gpgcheck=1 gpgkey=http://121.36.84.172/dailybuild/EBS-openEuler-24.03-LTS-SP1/rc3_openeuler-2024-11-28-17-26-22/OS/$basearch/RPM-GPG-KEY-openEuler ```
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