Bioinformatics Research and Achievement Display Platform for BIO SIG

Toolkit for processing sequences in FASTA/Q formats.

Tools for early stage alignment file processing

StringTie is a fast and highly efficient assembler of RNA-Seq alignments into potential transcripts.

Ultra-fast de novo assembler using long noisy reads

Tools (written in C using htslib) for manipulating next-generation sequencing data

Picard is a set of command line tools for manipulating high-throughput sequencing (HTS) data and formats such as SAM/BAM/CRAM and VCF.

A program for the Bayesian estimation of phylogeny

Multiple alignment program for amino acid or nucleotide sequences

A New and Scalable Tool for the Selection of DNA and Protein Evolutionary Models

A set of tools written in Perl and C++ for working with VCF files

A quality control analysis tool for high throughput sequencing data

A tool designed to provide fast all-in-one preprocessing for FastQ files. This tool is developed in C++ with multithreading supported to afford high performance.

Wtdbg2 is a de novo sequence assembler for long noisy reads produced by PacBio or Oxford Nanpopore Technologies(ONT).

Efficient phylogenomic software by maximum likelihood