• 2
• 0
• 0

stats

• 2
• 0
• 0

karttapullautin2tiles

Convert output of karttapullautin to a web map tile directory

• 2
• 0
• 0

kartapullautin2tiles

Convert output of karttapullautin to a web map tile directory

• 2
• 0
• 0

decoupler-py

Python package to perform enrichment analysis from omics data.

• 2
• 0
• 0

hiyapyco

HiYaPyCo - A Hierarchical Yaml Python Config

• 2
• 0
• 0

PyDESeq2

A Python implementation of the DESeq2 pipeline for bulk RNA-seq DEA.

• 2
• 0
• 0

samshee

A schema-agnostic parser and writer for illumina® sample sheets v2 and similar documents.

• 2
• 0
• 0

demultiplex

Demultiplexing pipeline for sequencing data

• 2
• 0
• 0

energymeter

Using a raspberry pi to monitor energy consumption in the house

• 3
• 0
• 0

scikit-bio

scikit-bio is an open-source, BSD-licensed, Python package providing data structures, algorithms, and educational resources for bioinformatics.

• 2
• 0
• 0

progeny-py

PROGENY Python implementation

• 2
• 0
• 0

dandelion

dandelion - A single cell BCR-seq analysis package for 10X Chromium 5' data

• 2
• 0
• 0

scanpy_helpers

My custom helper functions for scanpy-based single-cell analyses.

• 2
• 0
• 0

containerize-conda

Turn an existing conda environment into a Singularity container

• 2
• 0
• 0

single_cell_data_integration

• 2
• 0
• 0

nxfvars

Access nextflow variables from python scripts or notebooks

• 2
• 0
• 0

subcellular_localization

• 2
• 0
• 0

python-ci-versioneer

Use github actions to autobump python versions (versioneer alternative)

• 2
• 0
• 0

orange-bio

• 2
• 0
• 0

nf-core-test

test repo for nf-core