1. IOBR整合了10种已发表的大家比较认可的肿瘤微环境解析方法:CIBERSORT (fraction, absolute), TIMER, xCell, MCP-counter, ESTIMATE, EPIC, IPS, quanTIseq, lsei; 2. IOBR收集了255个已经发表的signatures,包括肿瘤微环境相关的,代谢相关的,m6A, 外泌体,铁凋亡和错配修复等通路
1. IOBR整合了10种已发表的大家比较认可的肿瘤微环境解析方法:CIBERSORT (fraction, absolute), TIMER, xCell, MCP-counter, ESTIMATE, EPIC, IPS, quanTIseq, lsei; 2. IOBR收集了255个已经发表的signatures,包括肿瘤微环境相关的,代谢相关的,m6A, 外泌体,铁凋亡和错配修复等通路
https://gitee.com/joyeric_admin_admin/seurat-disk.git
PISCES: A pipeline for the Systematic, Protein Activity-based Analysis of Single Cell RNA Sequencing Data
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