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https://gitee.com/joyeric_admin_admin/irGSEA.git

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Watch JoyEric/IOBR

1. IOBR整合了10种已发表的大家比较认可的肿瘤微环境解析方法：CIBERSORT (fraction, absolute), TIMER, xCell, MCP-counter, ESTIMATE, EPIC, IPS, quanTIseq, lsei; 2. IOBR收集了255个已经发表的signatures，包括肿瘤微环境相关的，代谢相关的，m6A, 外泌体，铁凋亡和错配修复等通路

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Visit project wiki for InferCNV documentation.

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TCGAbiolinks

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Watch JoyEric/tabula-sapiens

Consortium TTS, Quake SR. The Tabula Sapiens: a multiple organ single cell transcriptomic atlas of humans. bioRxiv 2021; 2021.07.19.452956